No description
Xiao Furen
0274e954be
Refactor the cylinder parameter selection and optimization process to improve accuracy and robustness. - Implement `snap_to_discrete_values_xfr` using a KDTree for efficient mapping of continuous diameter and length values to a predefined set of discrete points. - Update `objective_function_xfr` to use the new snapping mechanism and introduce a weighted loss component for diameter and length. - Adjust PSO optimization bounds and search ranges in `run_pso_torch_xfr` to better align with image dimensions and anatomical constraints. - Refine scoring logic in `cl_score_torch_xfr` with updated penalty weights for overlaps and out-of-bone voxels. - Update `config/constant.py` with new allowed diameter and length ranges. - Improve `imaging/preprocessing.py` by making `PROGRESS_FILE` a parameter to allow per-output-directory progress tracking. - Update `xfr_debug.py` with improved error handling and directory paths for batch processing. |
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| .kilo/agents | ||
| .vscode | ||
| config | ||
| core | ||
| imaging | ||
| results | ||
| utils | ||
| visualization | ||
| .gitignore | ||
| __init__.py | ||
| experiment.ipynb | ||
| optimization_benchmark_results_DE.csv | ||
| optimization_benchmark_results_NM.csv | ||
| optimization_benchmark_results_PSO.csv | ||
| progress.json | ||
| run_all_cases.py | ||
| run_benchmark.py | ||
| run_de.py | ||
| run_pso.py | ||
| structure.txt | ||
| xfr_debug.py | ||
| xfr_preprocess.py | ||