No description
Xiao Furen
4204d2cd4c
Implement a more robust scoring mechanism for screw optimization and add functionality to generate synthetic X-ray projections (AP and lateral views) from CT data. Key changes: - core: add `generate_cylinder_butt_torch` to create a mask for the screw entrance (0.25mm) to exempt it from bone-breaching penalties. - core: update `cl_score_torch_xfr` to include a diameter preference bonus and utilize the entrance mask. - core: adjust optimizer bounds and scoring weights to favor larger diameter screws and improve convergence. - xfr_cbt_native: implement `render_xray_projections` to generate synthetic AP and lateral X-ray images for visualization. - visualization: enhance `render_bone_figure` with semi-transparent spinous process rendering and improved depth sorting for screws. - xfr_debug: improve level detection to support arbitrary lumbar levels (L1-L9) and add safe volume-level cleanup for CBT writing. - config: update allowed diameters and lengths constants. |
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| .kilo/agents | ||
| .vscode | ||
| config | ||
| core | ||
| imaging | ||
| references | ||
| results | ||
| utils | ||
| visualization | ||
| .gitignore | ||
| __init__.py | ||
| experiment.ipynb | ||
| optimization_benchmark_results_DE.csv | ||
| optimization_benchmark_results_NM.csv | ||
| optimization_benchmark_results_PSO.csv | ||
| progress.json | ||
| run_all_cases.py | ||
| run_benchmark.py | ||
| run_de.py | ||
| run_pso.py | ||
| structure.txt | ||
| xfr_cbt_native.py | ||
| xfr_check_spinous.py | ||
| xfr_debug.py | ||
| xfr_inverse_transform.py | ||
| xfr_migrate_crop.py | ||
| xfr_orig_labels.py | ||
| xfr_plot_level.py | ||
| xfr_preprocess.py | ||
| xfr_reprocess_ap.py | ||
| xfr_rerender_spinous.py | ||