Replace the conda-forge-dependent Elastix CLI path with the pip-installable ITK-Elastix Python components so the benchmark can run elastix in the main environment. Add SimpleITK/ITK image and transform conversion helpers, and use the elastix 5.x EulerTransform rigid pipeline with Mattes MI and ASGD. Update REGISTRATION_BENCHMARK.md and bench_registration.py documentation to reflect the new elastix availability, results, and multi-environment merge workflow. Ignore local elastix output directories in .gitignore.
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data
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runs/
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results/
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logs/
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nnu/
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runs_bench/
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runs_nnu/
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runs_monai/
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__pycache__/
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elastix/ |