Furen Xiao
e8dfe0fe35
Update M6 manifest building to register T1c to CT with rigid Mattes MI on a CT-space head box, including multi-start initial tilts for large inter-session head motion. The inverse transform warps CT and GTV into T1c native space, with acceptance based on concentricity of the warped CT skull ring and MR head silhouette. Rerun preprocessing when a row has a label but the warped label file is missing. Normalize volume orientation in read_nii_img. Add registration benchmark documentation, benchmark script, and shared registration pipeline helpers. |
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| .. | ||
| 01_build_ntuh_manifest.py | ||
| 02_build_m6_dataset.py | ||
| 03_scan_lee_t1c.py | ||
| 04_reconstruct_lee.py | ||
| 05_build_splits.py | ||
| 06_pseudo_label.py | ||
| 07_train.py | ||
| 08_eval.py | ||
| 09_run_iterative.py | ||
| bench_registration.py | ||
| benchmark_pipelines.py | ||
| make_screenshots.py | ||
| preprocess.py | ||
| scan_procs.py | ||
| test_dataloader.py | ||