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Furen Xiao 12143e5bb8 fix(label_qa): resample TV warps to the 0.5 mm T1c grid 
Warp the binary TV mask onto the resampled 0.5 mm T1c grid before
visual QA, derive SMD thresholds from the native CT spacing using
normal-distribution theory, and widen the zoom context to 24 voxels.
Keep metrics on the native grid while rendering 0.5 mm slices, and
rename warped outputs to *_tv05.nii.gz.
2026-10-04 14:59:39 +08:00
..
01_build_ntuh_manifest.py feat: refactor path handling and add configuration for external data directories 2026-09-27 10:17:33 +08:00
02_build_m6_dataset.py Enhance registration pipelines with CT clipping and NiftyReg Docker support 2026-09-29 17:31:24 +08:00
03_scan_lee_t1c.py fix(t1c): exclude TOF MRA and subtraction series 2026-09-27 18:45:09 +08:00
04_reconstruct_lee.py fix(lee): exclude SSFP sequences and enhance T1c exclusion notes 2026-09-27 15:29:02 +08:00
05_build_splits.py feat: refactor path handling and add configuration for external data directories 2026-09-27 10:17:33 +08:00
06_pseudo_label.py feat: refactor path handling and add configuration for external data directories 2026-09-27 10:17:33 +08:00
07_train.py feat: initial project structure 2026-09-25 16:00:37 +08:00
08_eval.py feat: initial project structure 2026-09-25 16:00:37 +08:00
09_run_iterative.py feat: refactor path handling and add configuration for external data directories 2026-09-27 10:17:33 +08:00
bench_registration.py Add visual QA script for TV label warping and registration methods 2026-10-04 08:32:56 +08:00
benchmark_pipelines.py fix(docs): update conda environment name to longitudinal-313 and Python version to 3.13 2026-09-28 21:01:45 +08:00
investigate_synthmorph.py Refactor code structure for improved readability and maintainability 2026-10-02 19:00:07 +08:00
investigate_synthmorph_mm.py Refactor code structure for improved readability and maintainability 2026-10-02 19:00:07 +08:00
make_screenshots.py feat: refactor path handling and add configuration for external data directories 2026-09-27 10:17:33 +08:00
preprocess.py feat(registration): align CT to T1c and add benchmarking 2026-09-28 16:20:30 +08:00
qa_label_interpolation.py fix(label_qa): resample TV warps to the 0.5 mm T1c grid 2026-10-04 14:59:39 +08:00
scan_procs.py feat: refactor path handling and add configuration for external data directories 2026-09-27 10:17:33 +08:00
test_dataloader.py feat: refactor path handling and add configuration for external data directories 2026-09-27 10:17:33 +08:00